Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914411.1_cds_XP_016464405.1_57445
CDS Infomation

[gene=LOC107787362] [db_xref=GeneID:107787362] [protein=arabinosyltransferase XEG113-like isoform X2] [protein_id=XP_016464405.1] [location=join(65088..65262,67299..67595,67703..67908,69547..69652,71031..71287,71713..71848,72623..72717,72813..72866,73178..73291,74253..74351,74437..74553,75258..75344,75460..75627)] [gbkey=CDS]
Sequence

ATGGCTTGGAACAATCCATTTAAGGAAATGGCGAATTCCAAGCCATTGTTCATGACGATC
TATGCAACGGTGTTGATCGGGATAGTATTCTCTTCTGTTTATGTGTTTTCAGCCATTTAC
TCTTCTCCTCATTCCTCCACCTTCTCTCTCTCTATTGCTCCTTCTGCTTCTTCAGATGCA
GAAGCAGAACCTTCTAGTCAAGCATCAAATTTTTCTCGTCTACAAGCAGATGGTCATTCA
ACACCACTGAATCCCCAGCTTCAAAGCAAATTATTGAAGGCAATTTGGACAGTTCCCCCA
GCGGGTTCAAAGATGCCAGATTTAGAAAGTTTCAGATTATCAAAAGAACTGGTTCAGGAA
AGAGTTATAGGCAATGTTGTAGTTGTGACCTTTGGTAACTATGCTTTCATGGATTTTATC
TTGACGTGGGTTAAACATTTGACGGATATGGGTGTTGAAAACCTTCTCGTCGGTGCAATG
GATACAAAGCTATTAGAGGCTCTTTATTGGAAAGGAGTACCAGTTTTTGATATGGGTAGC
CATATGAGCACTGTAGATGTTGGATGGGGTTCACCAACATTTCACAAAATGGGGAGAGAG
AAAGTTGTACTCATAGATTCTATCTTACCTTTTGGCTTTGAACTCCTAATGTGTGATACC
GATATGGTGTGGTTAAAGAATCCTCTTCCTTATATTGCACGTTTCCCTGAAGCAGATGTA
TTGACCTCTACTGATCAAGTTGTACCAACAGTTACCGATGACAGATTGGACATGTGGCAA
CAAGTTGGCGCTGCTTATAATATTGGAATCTTCCACTGGCGGGCCACTGAGTCTTCTAAG
AAACTGGCCAGGGAATGGAAAGAAATGATTTTAGCTGACGACAAGATATGGGATCAGAAT
GGTTTCAATGAACTTGTGCGCAGACAGTTGGGACCTTCTGTTGATGATGACAGTGGGCTC
GTCTATGCTTATGATGGAAATCTCAAGCTTGGTCTTCTCCCAGCAAGTATTTTTTGTAGT
GGGCACACCTATTTCGTCCAGGCTATGTTTCAACATCTAAGATTGCAGCCTTATGCTGTA
CATACAACATTCCAATATGCTGGAACTGAAGGAAAGCGTCACCGATTGCGTGAAGCCATG
GTGTTCTATGATCCACCCGAATACTATGATCCACCAGGAGGGCTTTTGACTTTTAAGCCT
TCAATCCCCAAGAACTTGTTACTGGATGGAGTGCACTCCATAGATACACACTTTGCTCTT
GTTAATTATCAGATGAAACAAATAAGGACTGCGCTTGCTGTTGCTTCGGTGCTAAATCGT
ACCTTGGTAATGCCCCCGCTGTGGTGCAGGTTGGATAGGTTGTGGTTTGGACATCCTGGT
ATTCTGGACGGTTCTTTGACAAGGCAACCTTTTGTTTGTCCTTTGGATCATGTTTTTGAG
ATTAATGTGATGTTGAAGGAAATGCCAGATGAGGAATTTGGACCTGGAATCAGTATTAGG
GAGTACTCATTATTCGAGAATCCATCAATGCCACAGGAGGTGAAAAGGTCGTGGCTTGAT
GTACATCTCTGCCAAGAAGGGTCACTGGGCTGTCAGGTTAACAGTACTAGTCAAACTGGG
GTTCTCAAACTTCCCAGACACACTAATGAAGAAACGTTGAAGACGGTATTCTCCAAGTTT
AACGATATGAAAGTAATCCAGTTCTCATCAATGCAAGATGCCTTTGATGGTTTCACGGAC
AAGACAAGGGAAGAACGATTCAGGAACCGTGTCAAGAGGTATGTAGGCATTTGGTGTTGT
GTGGAGAATCACACACCAGGTCATATATACTATGATATGTATTGGGATGAGAAACCTGGT
TGGAAAGCAGCAGCTCCCAACTCTACGGAAGATGATCATCCGCCTTGGTGA

Peptide Sequence

PEP ID

XP_016464405.1
PEP Infomation

PREDICTED: arabinosyltransferase XEG113-like isoform X2 [Nicotiana tabacum]
Sequence

MAWNNPFKEMANSKPLFMTIYATVLIGIVFSSVYVFSAIYSSPHSSTFSLSIAPSASSDA
EAEPSSQASNFSRLQADGHSTPLNPQLQSKLLKAIWTVPPAGSKMPDLESFRLSKELVQE
RVIGNVVVVTFGNYAFMDFILTWVKHLTDMGVENLLVGAMDTKLLEALYWKGVPVFDMGS
HMSTVDVGWGSPTFHKMGREKVVLIDSILPFGFELLMCDTDMVWLKNPLPYIARFPEADV
LTSTDQVVPTVTDDRLDMWQQVGAAYNIGIFHWRATESSKKLAREWKEMILADDKIWDQN
GFNELVRRQLGPSVDDDSGLVYAYDGNLKLGLLPASIFCSGHTYFVQAMFQHLRLQPYAV
HTTFQYAGTEGKRHRLREAMVFYDPPEYYDPPGGLLTFKPSIPKNLLLDGVHSIDTHFAL
VNYQMKQIRTALAVASVLNRTLVMPPLWCRLDRLWFGHPGILDGSLTRQPFVCPLDHVFE
INVMLKEMPDEEFGPGISIREYSLFENPSMPQEVKRSWLDVHLCQEGSLGCQVNSTSQTG
VLKLPRHTNEETLKTVFSKFNDMKVIQFSSMQDAFDGFTDKTREERFRNRVKRYVGIWCC
VENHTPGHIYYDMYWDEKPGWKAAAPNSTEDDHPPW

Transcript Sequence

Gene sequence data has not been registered.